Index

A

active_image_object (neurotorchmz.core.session.Session property) active_image_signal (neurotorchmz.core.session.Session property)

add_roi() (neurotorchmz.utils.synapse_detection.MultiframeSynapse method) add_rois() (neurotorchmz.utils.synapse_detection.MultiframeSynapse method)

C

CircularSynapseROI (class in neurotorchmz.utils.synapse_detection) CLASS_DESC (neurotorchmz.utils.synapse_detection.CircularSynapseROI attribute) (neurotorchmz.utils.synapse_detection.ISynapseROI attribute) (neurotorchmz.utils.synapse_detection.PolygonalSynapseROI attribute)

clear_rois() (neurotorchmz.utils.synapse_detection.MultiframeSynapse method) coords (neurotorchmz.utils.synapse_detection.PolygonalSynapseROI attribute)

D

delta video: detect() (neurotorchmz.utils.synapse_detection.HysteresisTh method) (neurotorchmz.utils.synapse_detection.IDetectionAlgorithm method) (neurotorchmz.utils.synapse_detection.LocalMax method) (neurotorchmz.utils.synapse_detection.Thresholding method)

DetectionError DetectionResult (class in neurotorchmz.utils.synapse_detection)

E

Edition (class in neurotorchmz.core.session)

F

frame (neurotorchmz.utils.synapse_detection.ISynapseROI attribute)

G

get_coordinates() (neurotorchmz.utils.synapse_detection.CircularSynapseROI method) (neurotorchmz.utils.synapse_detection.ISynapseROI method) (neurotorchmz.utils.synapse_detection.PolygonalSynapseROI method) get_distance() (neurotorchmz.utils.synapse_detection.ISynapseROI method)

get_roi_description() (neurotorchmz.utils.synapse_detection.ISynapse method) (neurotorchmz.utils.synapse_detection.MultiframeSynapse method) (neurotorchmz.utils.synapse_detection.SingleframeSynapse method) get_signal_from_image() (neurotorchmz.utils.synapse_detection.ISynapseROI method)

H

HysteresisTh (class in neurotorchmz.utils.synapse_detection)

I

IDetectionAlgorithm (class in neurotorchmz.utils.synapse_detection) ijH (neurotorchmz.core.session.Session property)

import_ijh() (neurotorchmz.core.session.Session method) ISynapse (class in neurotorchmz.utils.synapse_detection) ISynapseROI (class in neurotorchmz.utils.synapse_detection)

L

launch() (neurotorchmz.core.session.Session method) LocalMax (class in neurotorchmz.utils.synapse_detection) location (neurotorchmz.utils.synapse_detection.ISynapse property) (neurotorchmz.utils.synapse_detection.ISynapseROI attribute) (neurotorchmz.utils.synapse_detection.MultiframeSynapse property) (neurotorchmz.utils.synapse_detection.SingleframeSynapse property)

location_string (neurotorchmz.utils.synapse_detection.ISynapse property) (neurotorchmz.utils.synapse_detection.ISynapseROI property)

M

module neurotorchmz.utils.synapse_detection

MultiframeSynapse (class in neurotorchmz.utils.synapse_detection)

N

name (neurotorchmz.utils.synapse_detection.ISynapse attribute) NEUROTORCH (neurotorchmz.core.session.Edition attribute) NEUROTORCH_DEBUG (neurotorchmz.core.session.Edition attribute)

NEUROTORCH_LIGHT (neurotorchmz.core.session.Edition attribute) neurotorchmz.utils.synapse_detection module notify_image_object_change() (neurotorchmz.core.session.Session method)

P

polygon (neurotorchmz.utils.synapse_detection.PolygonalSynapseROI attribute)

PolygonalSynapseROI (class in neurotorchmz.utils.synapse_detection)

R

radius (neurotorchmz.utils.synapse_detection.CircularSynapseROI attribute) region_props (neurotorchmz.utils.synapse_detection.ISynapseROI attribute) remove_roi() (neurotorchmz.utils.synapse_detection.MultiframeSynapse method) reset() (neurotorchmz.utils.synapse_detection.HysteresisTh method) (neurotorchmz.utils.synapse_detection.IDetectionAlgorithm method) (neurotorchmz.utils.synapse_detection.LocalMax method) (neurotorchmz.utils.synapse_detection.Thresholding method)

roifinder_detection_result (neurotorchmz.core.session.Session property) rois (neurotorchmz.utils.synapse_detection.ISynapse property) rois_dict (neurotorchmz.utils.synapse_detection.ISynapse property) root (neurotorchmz.core.session.Session property)

S

serialize() (neurotorchmz.utils.synapse_detection.ISynapseROI method) Session (class in neurotorchmz.core.session) set_active_image_object() (neurotorchmz.core.session.Session method) set_frame() (neurotorchmz.utils.synapse_detection.ISynapseROI method) set_location() (neurotorchmz.utils.synapse_detection.ISynapseROI method) (neurotorchmz.utils.synapse_detection.MultiframeSynapse method) set_name() (neurotorchmz.utils.synapse_detection.ISynapse method) set_polygon() (neurotorchmz.utils.synapse_detection.PolygonalSynapseROI method) set_radius() (neurotorchmz.utils.synapse_detection.CircularSynapseROI method) set_region_props() (neurotorchmz.utils.synapse_detection.ISynapseROI method)

set_roi() (neurotorchmz.utils.synapse_detection.SingleframeSynapse method) set_rois() (neurotorchmz.utils.synapse_detection.MultiframeSynapse method) SimpleCustering (class in neurotorchmz.utils.synapse_detection) SingleframeSynapse (class in neurotorchmz.utils.synapse_detection) staged (neurotorchmz.utils.synapse_detection.ISynapse attribute) Start() (in module neurotorchmz) Start_Background() (in module neurotorchmz) synapse_analysis_detection_result (neurotorchmz.core.session.Session property) SynapseClusteringAlgorithm (class in neurotorchmz.utils.synapse_detection) synapses (neurotorchmz.utils.synapse_detection.DetectionResult property) synapses_dict (neurotorchmz.utils.synapse_detection.DetectionResult property)

T

Thresholding (class in neurotorchmz.utils.synapse_detection)

U

uuid (neurotorchmz.utils.synapse_detection.ISynapse attribute) (neurotorchmz.utils.synapse_detection.ISynapseROI attribute)